ARL6

ADP-ribosylation factor-like protein 6 is a protein that in humans is encoded by the ARL6 gene.^[5][6][7]

PDBOrtholog search: PDBe RCSB

AliasesARL6, BBS3, RP55, ADP-ribosylation factor-like 6, ADP ribosylation factor like GTPase 6

External IDsOMIM: 608845; MGI: 1927136; HomoloGene: 12960; GeneCards: ARL6; OMA:ARL6 - orthologs

Chr.Chromosome 3 (human)^[1]

Quick facts Available structures, PDB ...

ARL6
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 2H57
Identifiers
Aliases	ARL6, BBS3, RP55, ADP-ribosylation factor-like 6, ADP ribosylation factor like GTPase 6
External IDs	OMIM: 608845; MGI: 1927136; HomoloGene: 12960; GeneCards: ARL6; OMA:ARL6 - orthologs
Gene location (Human) Chr. Chromosome 3 (human)[1] Band 3q11.2 Start 97,764,521 bp[1] End 97,801,229 bp[1]
Gene location (Mouse) Chr. Chromosome 16 (mouse)[2] Band 16|16 C1.3 Start 59,433,312 bp[2] End 59,459,754 bp[2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in Brodmann area 23 endothelial cell middle temporal gyrus sperm bronchial epithelial cell testicle oocyte prefrontal cortex Brodmann area 9 right uterine tube Top expressed in olfactory epithelium retina neural layer of retina epithelium of lens retinal pigment epithelium Epithelium of choroid plexus spermatid vestibular sensory epithelium spermatocyte facial motor nucleus More reference expression data BioGPS More reference expression data
Gene ontology Molecular function nucleotide binding GTP binding metal ion binding protein binding phospholipid binding GTPase activity Cellular component cytoplasm cytosol cell projection BBSome membrane plasma membrane intracellular anatomical structure axoneme membrane coat extracellular exosome cytoskeleton axonemal microtubule cilium Biological process protein polymerization retina layer formation protein localization to non-motile cilium response to stimulus protein targeting to membrane small GTPase mediated signal transduction Wnt signaling pathway regulation of smoothened signaling pathway brain development determination of left/right symmetry cell projection organization protein localization to cilium melanosome transport protein transport fat cell differentiation visual perception cilium assembly protein transport from ciliary membrane to plasma membrane transport intracellular protein transport vesicle-mediated transport Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 84100 56297 Ensembl ENSG00000113966 ENSMUSG00000022722 UniProt Q9H0F7 O88848 RefSeq (mRNA) NM_001278293 NM_032146 NM_177976 NM_001323513 NM_001323514 NM_019665 NM_001347244 RefSeq (protein) NP_001265222 NP_001310442 NP_001310443 NP_115522 NP_816931 NP_001334173 NP_062639 Location (UCSC) Chr 3: 97.76 – 97.8 Mb Chr 16: 59.43 – 59.46 Mb PubMed search [3] [4]
Wikidata
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The protein encoded by this gene belongs to the ARF family of GTP-binding proteins. ARF proteins are important regulators of cellular traffic and are the founding members of an expanding family of homologous proteins and genomic sequences. They depart from other small GTP-binding proteins by a unique structural device that implements front-back communication from the N-terminus to the nucleotide-binding site. Studies of the mouse ortholog of this protein suggest an involvement in protein transport, membrane trafficking, or cell signaling during hematopoietic maturation. Alternative splicing occurs at this locus and two transcript variants encoding the same protein have been described.^[7]