FARP1

FERM, RhoGEF and pleckstrin domain-containing protein 1 is a protein that in humans is encoded by the FARP1 gene.^[5][6]

PDBOrtholog search: PDBe RCSB

AliasesFARP1, CDEP, FARP1-IT1, PLEKHC2, PPP1R75, FERM, ARH/RhoGEF and pleckstrin domain protein 1

External IDsOMIM: 602654; MGI: 2446173; HomoloGene: 38098; GeneCards: FARP1; OMA:FARP1 - orthologs

Chr.Chromosome 13 (human)^[1]

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FARP1
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 4H6Y
Identifiers
Aliases	FARP1, CDEP, FARP1-IT1, PLEKHC2, PPP1R75, FERM, ARH/RhoGEF and pleckstrin domain protein 1
External IDs	OMIM: 602654; MGI: 2446173; HomoloGene: 38098; GeneCards: FARP1; OMA:FARP1 - orthologs
Gene location (Human) Chr. Chromosome 13 (human)[1] Band 13q32.2 Start 98,142,562 bp[1] End 98,455,176 bp[1]
Gene location (Mouse) Chr. Chromosome 14 (mouse)[2] Band 14|14 E5 Start 121,272,612 bp[2] End 121,521,156 bp[2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in renal medulla stromal cell of endometrium corpus epididymis ganglionic eminence human kidney ventricular zone epithelium of colon right lobe of liver parotid gland thyroid gland Top expressed in internal carotid artery external carotid artery mandibular prominence molar maxillary prominence hand Gonadal ridge medullary collecting duct vas deferens pituitary gland More reference expression data BioGPS More reference expression data
Gene ontology Molecular function guanyl-nucleotide exchange factor activity cytoskeletal protein binding Cellular component cytosol cell projection membrane filopodium extrinsic component of cytoplasmic side of plasma membrane plasma membrane dendritic spine synapse cell junction dendrite neuron projection cytoskeleton cytoplasm Biological process dendrite morphogenesis negative regulation of phosphatase activity multicellular organism development synapse assembly regulation of Rho protein signal transduction Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 10160 223254 Ensembl ENSG00000152767 ENSMUSG00000025555 UniProt Q9Y4F1 F8VPU2 RefSeq (mRNA) NM_001001715 NM_001286839 NM_005766 NM_134082 RefSeq (protein) NP_001001715 NP_001273768 NP_005757 NP_598843 Location (UCSC) Chr 13: 98.14 – 98.46 Mb Chr 14: 121.27 – 121.52 Mb PubMed search [3] [4]
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This gene was originally isolated through subtractive hybridization due to its increased expression in differentiated chondrocytes versus dedifferentiated chondrocytes. The resulting protein contains a predicted ezrin-like domain, a Dbl homology domain, and a pleckstrin homology domain. It is believed to be a member of the band 4.1 superfamily whose members link the cytoskeleton to the cell membrane. Two alternatively spliced transcript variants encoding distinct isoforms have been found for this gene.^[6]