Intelectin
From Wikipedia, the free encyclopedia
Intelectins are lectins (carbohydrate-binding proteins) expressed in humans and other chordates. Humans express two types of intelectins encoded by ITLN1 and ITLN2 genes respectively.[1][2] Several intelectins bind microbe-specific carbohydrate residues. Therefore, intelectins have been proposed to function as immune lectins.[3][4] Even though intelectins contain fibrinogen-like domain found in the ficolins family of immune lectins, there is significant structural divergence.[5] Thus, intelectins may not function through the same lectin-complement pathway. Most intelectins are still poorly characterized and they may have diverse biological roles. Human intelectin-1 (hIntL-1) has also been shown to bind lactoferrin,[6] but the functional consequence has yet to be elucidated. Additionally, hIntL-1 is a major component of asthmatic mucus[7] and may be involved in insulin physiology as well.[8]
| Xenopus embryonic epidermal lectin | |||||||
|---|---|---|---|---|---|---|---|
Monomeric structure of XEEL-CRD with bound D-glycerol 1-phosphate. The protein is colored using a blue-red gradient from the N- to the C- terminus. Calcium ions are shown as green spheres and the coordinated water molecules are shown as red spheres. | |||||||
| Identifiers | |||||||
| Organism | |||||||
| Symbol | itln1 | ||||||
| Entrez | 398574 | ||||||
| HomoloGene | 111044 | ||||||
| PDB | 4WN0 | ||||||
| RefSeq (mRNA) | NM_001089101.1 | ||||||
| RefSeq (Prot) | NP_001082570.1 | ||||||
| UniProt | Q800K0 | ||||||
| |||||||
| Human intelectin-1 | |||||||
|---|---|---|---|---|---|---|---|
Monomeric structure of human intelectin with bound allyl-beta-D-galactofuranose. The protein is colored using a blue-red gradient from the N- to the C- terminus. Calcium ions are shown as green spheres and the coordinated water molecules are shown as red spheres. | |||||||
| Identifiers | |||||||
| Symbol | ITLN1 | ||||||
| Alt. symbols | hIntL-1 | ||||||
| NCBI gene | 55600 | ||||||
| HGNC | 18259 | ||||||
| OMIM | 609873 | ||||||
| PDB | 4WMY | ||||||
| RefSeq | NP_060095 | ||||||
| UniProt | Q8WWA0 | ||||||
| Other data | |||||||
| Locus | Chr. 1 q21.3 | ||||||
| |||||||
Diversity
The first intelectin was discovered in Xenopus laevis oocyte and is named XL35 or XCGL-1.[9][10][11] X. laevis oocyte also contains a closely related XCGL-2.[12] In addition, X. laevis embryos secrete Xenopus embryonic epidermal lectin into the environmental water, presumably to bind microbes.[13][14] XSL-1 and XSL-2 are also expressed in X. laevis serum when stimulated with lipopolysaccharide.[15] Two additional intestinal intelectins are discovered in X. laevis[16]
Human has two intelectins: hIntL-1 (omentin) and hIntL-2.[17] Mouse also has two intelectins: mIntL-1 and mIntL-2.[18]
Immune system
Several lines of evidence suggest that intelectins recognize microbes and may function as an innate immune defense protein. Tunicate intelectin is an opsonin for phagocytosis by hemocyte.[19] Amphioxus intelectin has been shown to agglutinate bacteria.[20][21] In zebrafish and rainbow trout, intelectin expression is stimulated upon microbial exposure.[22][23][24] Mammals such as sheep and mice also upregulate intelectin expression upon parasitic infection.[25][26] Increase in intelectin expression upon microbial exposure support the hypothesis that intelectins play a role in the immune system.
Structure
Although intelectins require calcium ion for function, the sequences bear no resemblance to C-type lectins.[3] In addition, merely around 50 amino acids (the fibronogen-like domain) align with any known protein, specifically the ficolin family.[2] The first structural details of an intelectin comes from the crystal structure of selenomethionine-labeled XEEL carbohydrate-recognition domain (Se-Met XEEL-CRD) solved by Se-SAD.[5] XEEL-CRD was expressed and Se-Met-labeled in High Five insect cells using a recombinant baculovirus. The fibrinogen-like fold is conserved despite amino acid sequence divergence. However, extensive insertions are present in intelectin compared to ficolins, thus making intelectin a distinct lectin structural class.[5] The Se-Met XEEL-CRD structure then enables the structure solution by molecular replacement of D-glycerol 1-phosphate (GroP)-bound XEEL-CRD,[5] apo-human intelectin-1 (hIntL-1),[4] and galactofuranose-bound hIntL-1.[4]
Each polypeptide chain of XEEL and hIntL-1 contains three bound calcium ions: two in the structural calcium site and one in the ligand binding site.[4][5] The amino acid residues in the structural calcium site are conserved among intelectins, thus it is likely that most, if not all, intelectins have two structural calcium ions.[5]
In the ligand binding site of XEEL and hIntL-1, the exocyclic vicinal diol of the carbohydrate ligand directly coordinates to the calcium ion.[4][5] There are large variations in the ligand binding site residues among intelectin homologs suggesting that the intelectin family may have broad ligand specificities and biological functions.[5] As there is no intelectin numbering conventions in different organisms, one should not assume functional homology based on the intelectin number. For example, hIntL-1 has glutamic acid residues in the ligand binding site to coordinate a calcium ion, while zebrafish intelectin-1 are devoided of these acidic residues.[5] Zebrafish intelectin-2 ligand binding site residues are similar to those present in hIntL-1.
- Xenopus embryonic epidermal lectin (XEEL) ligand binding site with bound D-glycerol 1-phosphate. The calcium ion is shown as a green sphere and the ordered water molecules are shown as red spheres.[5]
- Human intelectin-1 (hIntL-1) ligand binding site with bound allyl-beta-D-galactofuranose. The calcium ion is shown as a green sphere and the ordered water molecules are shown as red spheres.[4]
Oligomeric state
hIntL-1 is a disulfide-linked trimer as shown by non-reducing SDS-PAGE[3] and X-ray crystallography.[4] Despite lacking the intermolecular disulfide bonds, XEEL-CRD is trimeric in solution.[5] The N-terminal peptide of the full length XEEL is responsible for dimerizing the trimeric XEEL-CRD into a disulfide-linked hexameric full-length XEEL.[5] Therefore, the N-termini of intelectins are often responsible for forming disulfide-linked oligomer. In intelectin homologs where the N-terminal cysteines are absent, the CRD itself may still capable of forming non-covalent oligomer in solution.
- Disulfide-linked trimeric human intelectin-1.[4]
- Trimeric Xenopus embryonic epidermal lectin carbohydrate-recognition domain (XEEL-CRD). Extensive biophysical investigations conclusively indicate that XEEL-CRD is trimeric in solution despite lacking the intermolecular disulfide bonds found in hIntL-1.[5]