PATZ1

Protein-coding gene in the species Homo sapiens From Wikipedia, the free encyclopedia

POZ-, AT hook-, and zinc finger-containing protein 1 is a protein that in humans is encoded by the PATZ1 gene.[5][6][7][8]

PDBOrtholog search: PDBe RCSB
AliasesPATZ1, MAZR, PATZ, RIAZ, ZBTB19, ZNF278, ZSG, dJ400N23, POZ/BTB and AT hook containing zinc finger 1
Quick facts Available structures, PDB ...
PATZ1
Available structures
PDBOrtholog search: PDBe RCSB
Identifiers
AliasesPATZ1, MAZR, PATZ, RIAZ, ZBTB19, ZNF278, ZSG, dJ400N23, POZ/BTB and AT hook containing zinc finger 1
External IDsOMIM: 605165; MGI: 1891832; HomoloGene: 8636; GeneCards: PATZ1; OMA:PATZ1 - orthologs
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_032052
NM_014323
NM_032050
NM_032051

NM_001253690
NM_001253691
NM_019574

RefSeq (protein)

NP_055138
NP_114439
NP_114440
NP_114441

NP_001240619
NP_001240620
NP_062520

Location (UCSC)Chr 22: 31.33 – 31.35 MbChr 11: 3.24 – 3.26 Mb
PubMed search[3][4]
Wikidata
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Function

The protein encoded by this gene contains an AT-hook DNA binding motif, which usually binds to other DNA binding structures to play an important role in chromatin modeling and transcription regulation. Its Poz domain is thought to function as a site for protein-protein interaction and is required for transcriptional repression, and the zinc-fingers comprise the DNA binding domain. Since the encoded protein has typical features of a transcription factor, it is postulated to be a repressor of gene expression. In small round cell sarcoma, this gene is fused to EWS by a small inversion of 22q, then the hybrid is thought to be translocated (t(1;22)(p36.1;q12). The rearrangement of chromosome 22 involves intron 8 of EWS and exon 1 of this gene creating a chimeric sequence containing the transactivation domain of EWS fused to zinc finger domain of this protein. This is a distinct example of an intra-chromosomal rearrangement of chromosome 22. Four alternatively spliced transcript variants are described for this gene.[8]

Interactions

References

Further reading

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