PCGF6

Polycomb group RING finger protein 6 is a protein that in humans is encoded by the PCGF6 gene.^[5][6]

PDBOrtholog search: PDBe RCSB

AliasesPCGF6, MBLR, RNF134, polycomb group ring finger 6

External IDsOMIM: 607816; MGI: 1918291; HomoloGene: 12378; GeneCards: PCGF6; OMA:PCGF6 - orthologs

Chr.Chromosome 10 (human)^[1]

Quick facts Available structures, PDB ...

PCGF6
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 2DJB
Identifiers
Aliases	PCGF6, MBLR, RNF134, polycomb group ring finger 6
External IDs	OMIM: 607816; MGI: 1918291; HomoloGene: 12378; GeneCards: PCGF6; OMA:PCGF6 - orthologs
Gene location (Human) Chr. Chromosome 10 (human)[1] Band 10q24.33 Start 103,302,796 bp[1] End 103,351,144 bp[1]
Gene location (Mouse) Chr. Chromosome 19 (mouse)[2] Band 19|19 C3 Start 47,022,056 bp[2] End 47,039,345 bp[2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in gonad ventricular zone gastrocnemius muscle testicle skeletal muscle tissue stromal cell of endometrium smooth muscle tissue ganglionic eminence tibial arteries muscle layer of sigmoid colon Top expressed in zygote spermatocyte primary oocyte secondary oocyte epiblast seminiferous tubule primitive streak Rostral migratory stream embryo tail of embryo More reference expression data BioGPS n/a
Gene ontology Molecular function DNA-binding transcription factor activity DNA binding RNA polymerase II transcription regulatory region sequence-specific DNA binding protein binding DNA-binding transcription repressor activity, RNA polymerase II-specific metal ion binding Cellular component nucleus PcG protein complex nucleoplasm PRC1 complex Biological process regulation of transcription, DNA-templated negative regulation of transcription by RNA polymerase II transcription, DNA-templated histone H2A-K119 monoubiquitination negative regulation of G0 to G1 transition negative regulation of transcription, DNA-templated inactivation of X chromosome by genetic imprinting Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 84108 71041 Ensembl ENSG00000156374 ENSMUSG00000025050 UniProt Q9BYE7 Q99NA9 RefSeq (mRNA) NM_001011663 NM_032154 NM_027654 NM_001360632 RefSeq (protein) NP_001011663 NP_115530 NP_081930 NP_001347561 Location (UCSC) Chr 10: 103.3 – 103.35 Mb Chr 19: 47.02 – 47.04 Mb PubMed search [3] [4]
Wikidata
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The protein encoded by this gene contains a RING finger motif, which is most closely related to those of polycomb group (PcG) proteins RNF110/MEL-18 and BMI1. PcG proteins are known to form protein complexes and function as transcription repressors. This protein has been shown to interact with some PcG proteins and act as a transcription repressor. The activity of this protein is found to be regulated by cell cycle dependent phosphorylation. Alternatively spliced transcript variants encoding different isoforms have been identified.^[6]