RFC1

Proteine From Wikipedia, the free encyclopedia

Replication factor C subunit 1 is a protein that in humans is encoded by the RFC1 gene.[5][6]

PDBOrtholog search: PDBe RCSB
AliasesRFC1, RFC, replication factor C subunit 1, A1, PO-GA, RECC1, MHCBFB, RFC140, CANVAS
Quick facts Available structures, PDB ...
RFC1
Available structures
PDBOrtholog search: PDBe RCSB
Identifiers
AliasesRFC1, RFC, replication factor C subunit 1, A1, PO-GA, RECC1, MHCBFB, RFC140, CANVAS
External IDsOMIM: 102579; MGI: 97891; HomoloGene: 2187; GeneCards: RFC1; OMA:RFC1 - orthologs
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_001204747
NM_002913
NM_001363495
NM_001363496

NM_011258
NM_001347357
NM_001347358

RefSeq (protein)

NP_001191676
NP_002904
NP_001350424
NP_001350425

NP_001334286
NP_001334287
NP_035388

Location (UCSC)Chr 4: 39.29 – 39.37 MbChr 5: 65.42 – 65.49 Mb
PubMed search[3][4]
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Function

The protein encoded by this gene is the large subunit of replication factor C, which is a five subunit DNA polymerase accessory protein. Replication factor C is a DNA-dependent ATPase that is required for eukaryotic DNA replication and repair. The protein acts as an activator of DNA polymerases, binds to the 3' end of primers, and promotes coordinated synthesis of both strands. It also may have a role in telomere stability.[6]

Interactions

Clinical relevance

Biallelic intronic repeat expansions (a series of repeating nucleotide sequences) in the replication factor C subunit 1 (RFC1) gene causes cerebellar ataxia, neuropathy and vestibular areflexia syndrome (CANVAS).[17] Within the poly(A) tail of an AluSx3 element in RFC1, there are eleven repeats of the pentanucleotide "AAAAG". Repeat expansion and polymorphic configuration are observed in part of the population, with increased number of repeats associated to alternative "AAAGG", "AAGGG" and "ACAGG" pentanucleotides.[18] In particular, biallelic "AAGGG" and "ACAGG" repeat expansion have disproportionately been observed in patients with CANVAS. Biallelic "AAGGG" repeat expansion is also reported in a high number of sporadic cases of late-onset ataxia,[17] isolate sensory neuropathy[19][20] and, less frequently, isolate cerebellar ataxia.[21] Due to a diagnostic overlap with CANVAS, researchers have also investigated the presence of RFC1 expansions in pathologically confirmed multiple system atrophy (MSA) but found a similar alteration frequency (0.7%) to a healthy population, suggesting RFC1 does not have a role in this disease.[22]

Mutant biallelic intronic repeat expansions do not affect RFC1 expression in patient peripheral and brain tissue, suggesting no overt loss of function of this gene.[17]

In patients with the pathogenic RFC1 expansion, sensory neuropathy appears to be a predominant feature and patients may also present with symptoms such as cerebellar dysfunction, vestibular involvement and a dry spasmodic cough therefore, genetic testing is recommended in those with these symptoms.[23]

References

Further reading

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