SF3B2

Protein-coding gene in the species Homo sapiens From Wikipedia, the free encyclopedia

Splicing factor 3B subunit 2 is a protein that in humans is encoded by the SF3B2 gene.[5][6]

PDBOrtholog search: PDBe RCSB
AliasesSF3B2, Cus1, SAP145, SF3B145, SF3b1, SF3b150, splicing factor 3b subunit 2, CFM
Quick facts Available structures, PDB ...
SF3B2
Available structures
PDBOrtholog search: PDBe RCSB
Identifiers
AliasesSF3B2, Cus1, SAP145, SF3B145, SF3b1, SF3b150, splicing factor 3b subunit 2, CFM
External IDsOMIM: 605591; MGI: 2441856; HomoloGene: 6678; GeneCards: SF3B2; OMA:SF3B2 - orthologs
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_006842

NM_030109
NM_001362454

RefSeq (protein)

NP_006833

NP_084385
NP_001349383

Location (UCSC)Chr 11: 66.05 – 66.07 MbChr 19: 5.32 – 5.35 Mb
PubMed search[3][4]
Wikidata
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Function

This gene encodes subunit 2 of the splicing factor 3b protein complex. Splicing factor 3b, together with splicing factor 3a and a 12S RNA unit, forms the U2 small nuclear ribonucleoproteins complex (U2 snRNP). The splicing factor 3b/3a complex binds pre-mRNA upstream of the intron's branch site in a sequence-independent manner and may anchor the U2 snRNP to the pre-mRNA. Splicing factor 3b is also a component of the minor U12-type spliceosome. Subunit 2 associates with pre-mRNA upstream of the branch site at the anchoring site. Subunit 2 also interacts directly with subunit 4 of the splicing factor 3b complex. Subunit 2 is a highly hydrophilic protein with a proline-rich N-terminus and a glutamate-rich stretch in the C-terminus.[6]

Interactions

SF3B2 has been shown to interact with SF3B4,[7][8] RBM7,[9] SF3B1[10][11] and CDC5L.[12]

References

Further reading

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