SMIM11

From Wikipedia, the free encyclopedia

Small integral membrane protein 11 is a protein which in humans is encoded by the SMIM11 gene.[3][4]

AliasesSMIM11, C21orf51, FAM165B, small integral membrane protein 11, SMIM11B, SMIM11A, small integral membrane protein 11A
End34,416,961 bp[1]
Quick facts Identifiers, Aliases ...
SMIM11
Identifiers
AliasesSMIM11, C21orf51, FAM165B, small integral membrane protein 11, SMIM11B, SMIM11A, small integral membrane protein 11A
External IDsHomoloGene: 129857; GeneCards: SMIM11; OMA:SMIM11 - orthologs
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_058182
NM_001376899

n/a

RefSeq (protein)

NP_478062
NP_001363828

n/a

Location (UCSC)Chr 21: 34.38 – 34.42 Mbn/a
PubMed search[2]n/a
Wikidata
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Gene

Locus

SMIM11 is located on the plus strand of chromosome 21 and has 4 exons.[4]

Expression of SMIM11A in human tissue samples

Expression

The expression of SMIM11 is highest in the brain, thyroid, and stomach, though it is also expressed in many other tissues.[4]

mRNA

There are no known transcript variants or isoforms of SMIM11.[5]

Protein

The SMIM11 protein is 58 amino acids long. The theoretical molecular weight of this protein is 6kDa and the theoretical pI is 9.[6] The protein is localized in the cytoplasm and mitochondria, as well as focal adhesion points between the cells.[7][8]

Domains, Motifs, and Post-translational Modifications

SMIM11 contains a transmembrane domain.[9] The protein also holds a dileucine motif. Post-translational modifications include ubiquitylation site, as well as two phosphorylated sites, one on a threonine and one on a serine[10][11]

Secondary Structure and Tertiary Structure

The protein is composed mostly of alpha-helices.[12] The N-terminus of SMIM11 sticks out into the extracellular matrix, while the C-terminal end is located within the cytoplasm of the cell.[13]

Tertiary Structure of SMIM11

Quaternary Structure and Protein Interactions

Experimentally-determined protein interactions for SMIM11 have not yet been identified.[14]

Concenptual translation of SMIM11

Homology and Evolution

Paralogs

No paralogs or paralogous domains exist for SMIM11

Orthologs

SMIM11 has a large number of orthologs. These orthologs range from other mammals to birds, reptiles, amphibians, and bony fish.[15]

Ortholog Table of SMIM11

References

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