SMN1

Protein-coding gene in humans From Wikipedia, the free encyclopedia

Survival of motor neuron 1 (SMN1), also known as component of gems 1 or GEMIN1, is a gene that encodes the SMN protein in humans.[5][6]The chemical formula is:C1394H2154N384O438S13[7]

PDBOrtholog search: PDBe RCSB
AliasesSMN1, BCD541, GEMIN1, SMNT, T-BCD541, TDRD16A, survival of motor neuron 1, telomeric, survival motor neuron 1, telomeric, SMA1, SMA4, SMA@, SMA2, SMA, SMA3, SMN
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SMN1
Available structures
PDBOrtholog search: PDBe RCSB
Identifiers
AliasesSMN1, BCD541, GEMIN1, SMNT, T-BCD541, TDRD16A, survival of motor neuron 1, telomeric, survival motor neuron 1, telomeric, SMA1, SMA4, SMA@, SMA2, SMA, SMA3, SMN
External IDsOMIM: 600354; MGI: 109257; HomoloGene: 292; GeneCards: SMN1; OMA:SMN1 - orthologs
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_000344
NM_001297715
NM_022874

NM_001252629
NM_011420

RefSeq (protein)

NP_001239558
NP_035550

Location (UCSC)Chr 5: 70.93 – 70.95 MbChr 13: 100.26 – 100.27 Mb
PubMed search[3][4]
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Gene

SMN1 is the telomeric copy of the gene encoding the SMN protein; the centromeric copy is termed SMN2. SMN1 and SMN2 are part of a 500 kbp inverted duplication on chromosome 5q13. This duplicated region contains at least four genes and repetitive elements which make it prone to rearrangements and deletions. The repetitiveness and complexity of the sequence have also caused difficulty in determining the organization of this genomic region. SMN1 and SMN2 are nearly identical and encode the same protein.[6] The critical sequence difference between the two is a single nucleotide in exon 7 which is thought to be an exon splice enhancer. It is thought that gene conversion events may involve the two genes, leading to varying copy numbers of each gene.[6]

Clinical significance

Mutations in SMN1 are associated with spinal muscular atrophy. Mutations in SMN2 alone do not lead to disease, although mutations in both SMN1 and SMN2 result in embryonic death.[citation needed]

References

Further reading

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