Vancosamine
Chemical compound
From Wikipedia, the free encyclopedia
Vancosamines are aminosugars that are a part of vancomycin and other molecules within the vancomycin family of antibiotics. Vancosamine synthesis is encoded by the vancomycin (vps) biosynthetic cluster. Epivancosamine, a closely related aminosugar, is encoded by the chloroeremomycin (cep) biosynthetic cluster.[1]
Cyclohexane and chair depictions of vancosamine (top) and epivancosamine (bottom). Note the differing stereocenter at carbon 4. | |
| Names | |
|---|---|
| IUPAC name
(3S,4S,5S)-3-Amino-4,5-dihydroxy-3-methylhexanal | |
| Other names
3-Amino-2,3,6-trideoxy-3-methyl-L-lyxo-hexopyranose | |
| Identifiers | |
3D model (JSmol) |
|
| ChemSpider | |
PubChem CID |
|
CompTox Dashboard (EPA) |
|
| |
| |
| Properties | |
| C7H15NO3 | |
| Molar mass | 161.201 g·mol−1 |
Except where otherwise noted, data are given for materials in their standard state (at 25 °C [77 °F], 100 kPa).
| |
History
Biosynthesis
The biosynthesis of vancosamine and epivancosamine are identical, except in the last step.[5] The enzymes that catalyze the reactions have been designated EvaA-E. A molecule of TDP-D-glucose enters the pathway via conversion to molecule 1 by an oxidoreductase enzyme and then a dehydratase enzyme. In the next step, EvaA dehydrates molecule 1 by deprotonating at 3-C to form and enolate, which then eliminates 2-OH, to form molecule 2. Molecule 2 is transformed into molecule 3 by tautomerizing to its keto form and then being transaminated by EvaB using L-Glu as the ammonia source and PLP as a cofactor.
Vancosamine biosynth part 1
EvaC then methylates molecule 3 at the 3-C to form molecule 4 by deprotonating to form an enolate intermediate, which then attacks a SAM methyl group in the active site of EvaC. EvaD then epimerizes molecule 4 at 5-C to form molecule 5. Finally, EvaE can form either epi/vancosamine by reduction using either NADH or NADPH to reduce the carbonyl at 4-C. The stereochemical outcome is dependent on the EvaE that is encoded in the biosynthetic cluster. Vancomycin vps EvaE results in vancosamine, whereas chloroeremomycin cep EvaE results in epivancosamine.
Vancosamine biosynthesis part 2
The vancosamines are then used by the cell to synthesized vancomycin and related molecules. A glycosyltransferase attaches the amino sugar through α-1 ether linkages.
Additional modifications are possible at the 3-C amino group to create N-alkyl or N-acyl derivatives of this sugar.