Talk:Evolution/Archive 24

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Fact vs. Theory complexity

I read through most of the archives on Fact vs. Theory (personally, it would make a great article on this inane discussion). Then I kept referring back to the section in Evolution article regarding the point. Every time I read the statement 'The paleontologist Stephen Jay Gould wrote that "evolution is a theory. It is also a fact,'" I keep thinking about the 2004 election, and the way John Kerry tried to use nuance to describe his stance on issues. Science is, by nature, highly nuanced. And unfortunately, the world at large is not. Would it not make more sense to start the conversation by simply stating, "Evolution is a fact." The discussion of what makes theory in science really a fact is difficult to follow, and I'm a pretty smart guy. If you're a brainwashed creationist, you're going to say, "see these guys just doublespeak." And I'm going to have to agree. Not with creationism, but with the doublespeak. Can a wordsmith or two amongst us make a summary sentence or two to lead into the subarticle on Fact vs. Theory? Just my opinion, but it could make the article just ever so slightly better.OrangeMarlin 23:44, 11 December 2006 (UTC)

Speaking as an outsider, I think that Gould just confused the issue. I would have rathered he helped to make clear concrete definitions. This just provides fodder for the rabid anti-science hordes.--Filll 00:33, 13 December 2006 (UTC)
Maybe we're the only two who care? So, can we make change, or will it cause a holy war?  :) OrangeMarlin 18:28, 13 December 2006 (UTC)
It is possible we can suggest something a bit clearer. I might try it here first on the talk page. If no one says anything then we can try it in the article. People might still object, but at least we can give them a chance to comment.--Filll 18:39, 13 December 2006 (UTC)

I have moved the material to Talk:Evolution/FactvsTheory to rewrite it. It is coming slowly. I think I can make it far clearer, and shorter.--Filll 20:15, 13 December 2006 (UTC)

I made some wordsmithing to help it make sense. Still sounds like a couple of politicians debating whether the sky is blue.  :) OrangeMarlin 23:43, 13 December 2006 (UTC)
Yes I am still editing it. The problem is that Gould, and possibly others, started this entire "fact" and "theory" thing that makes it completely confusing. Either we ignore this, which is a bit difficult since I think it is all through the field and the debate with creationists, or we try to make it clear. My thought is to
  • explain clearly what fact and theory are in science
  • use gravity as a noncontroversial example
  • claim that the entire discussion is also true for evolution and show how evolution is both "fact" and theory"
  • after all that, show the Gould quote which is fairly famous I think
  • possibly discuss hypotheses and laws after that--Filll 23:52, 13 December 2006 (UTC)


Ok I have taken a first rewrite of it. It is longer than I wanted. Some of that material we can chuck I suspect. Or move it to the creationism vs. evolution controversy article. Or make a separate article out of it, as you suggest. That is not the worst idea, frankly. Have at it and see if you can make it better. --Filll 00:39, 14 December 2006 (UTC)
I went back to the location, and all of my edits are gone. Maybe they weren't so good? OrangeMarlin 00:43, 14 December 2006 (UTC)
They are? I didn't change them. We did write overtop of each other a little so that might have caused problems and some edit conflicts. But it should be ok now.--Filll 13:26, 14 December 2006 (UTC)
I have edited it a bit more. I think it is still too long but it is at least clearer than what we have now. Maybe it could be made a separate article, and a short summary be published here. And also at the Creation-evolution controversy page. --Filll 13:57, 14 December 2006 (UTC)

SUGGESTION: I wonder if placing the case for gravity being a fact and a theory, in a blue box with divisions, side by side with the parallel case for evolution being a fact and a theory, would be helpful?--Filll 13:57, 14 December 2006 (UTC)

Yes. I hold my breath waiting for your edit 8=) Candy 14:14, 14 December 2006 (UTC)
There are plenty of nested hypotheses, but I thought most of the laws (Dollo's, Cope's, etc) had mostly fallen out of favor?GetAgrippa 17:23, 14 December 2006 (UTC)
Yes I think that in both gravity and in evolution, the field is littered with a large number of discarded hypotheses, theories, speculations, conjectures, laws, etc. I try to make this clear by describing 3 discarded theories of gravity, and 3 discarded theories of evolution. Of course I could list far more, but that would be more appropriate for the history of science. All I want to do is to make this "fact and theory" controversy a bit more clear. Please take a look at what I have written at Talk:Evolution/FactvsTheory and give me your feedback. --Filll 17:39, 14 December 2006 (UTC)

Potential infoboxes for fact vs. theory

Some rough draft versions of infobox type tables on this subject are available for your inspection at Talk:Evolution/FactvsTheory.--Filll 16:09, 14 December 2006 (UTC)

Section on hybridization

I have talked about it but hadn't noticed that it is not mentioned in the article. Hybridization is significant in speciation in plants and birds to some degree (one in ten of known bird species and estimated to be much higher). There are also examples of mammals too. I think a plant person could give a sound argument to mention hybrization in plants especially. Perhaps a small section after HGT or mention it in the mutations section. GetAgrippa 00:54, 12 December 2006 (UTC)

I added a simple paragraph on hybridization in mutations section. I can add references for bird info, etc. Hybridization in plants is so significant often producing offspring with new traits different from either parent and adapted to different environment than either parent. GetAgrippa 04:04, 12 December 2006 (UTC)

Oops! Hybridization is mentioned in HGT, but should be in Gene flow section.GetAgrippa 06:31, 12 December 2006 (UTC)

Propose fusing Horizontal gene transfer with Gene flow

Shouldn't HGT be included in Gene flow section? It would fit with Gene flow article that includes HGT. I guess hybridization should be included in Gene flow article also. GetAgrippa 06:24, 12 December 2006 (UTC) I noted that the Founder effect is mentioned in Genetic drift and Gene flow sections. It is usually referred to as Genetic drift is my understanding.GetAgrippa 06:39, 12 December 2006 (UTC)


Well with all the bold changes going on I moved HGT intact to Gene flow section. The Gene flow article includes HGT so it all flows. GetAgrippa 01:07, 13 December 2006 (UTC)

Evolution by Natural Selection, an introduction to the logic of evolution by natural selection Maybe it will be back up later?--Filll 18:22, 12 December 2006 (UTC)

Introduction section

No no no noooooooo. See WP:LEAD and WP:WIAFA. I'm rv-ing it. (It not only looks disgusting, it breaks the layout in IE. That and it's confusing - why have a lead AND an introduction?) Mikker (...) 22:37, 12 December 2006 (UTC)

I think I've fixed this, though I must say we ought to be able to do better than the second and third paragraphs, which are unchanged. Well, let's see if I'm reverted. Adam Cuerden talk 22:59, 12 December 2006 (UTC)
No. Vote to revert. This is more complicated than the original and is redundant. I thought the plan was a simple intro. No mention of Gene flow which encompasses hybridization and HGT. GetAgrippa 00:02, 13 December 2006 (UTC)
Oh, you changed the whole intro so not redundant. May have been premature to judgment. It does seem more complicated than the Jr. edition I thought suggested. I tried tweaking the first paragraph of the original leaving it mostly intact, however it ended up oddly phrased and hyperlinked to death.GetAgrippa 00:28, 13 December 2006 (UTC)
Actually, although this is not the right place to bring this up, in PROFESSIONAL level publications, it is very common to have multiple introduction-like things such as an:
  • abstract
  • introduction
  • summary
  • executive summary
etc. The present long baggy introduction just looks intimidating and of no value. If a reader just knows that they have 3 or 4 sentences to read in the first section (lead or whatever), and that tells them what the subject is about and what is roughly in the article, the article will be far more accessible and welcoming.--Filll 00:37, 13 December 2006 (UTC)
I strongly disagree, for the simple reason that once we leave the lead section, the complexity ramps up immensely. While I'd be quite happy to cut things after the first paragraph, the old introduction, as I say below, was only a long list of terms, and to have an article on evolution without any simple introduction to natural selection is, frankly, bizarre. This is not an easy article, and if we can in one paragraph explain the major topics of evolution - as I hope I did - while keeping it fairly simple and easy to understand - as I hope I have - I honestly can't see why the other introduction, which explains next to nothing unless one follows all the links - and if one has to read ten articles to understand those few sentences, your point is moot. This is an encyclopedia, not a business proposal. Adam Cuerden talk 00:47, 13 December 2006 (UTC)
Well, if you want to advocate a change like this, it will have to go through talk:WP:LAYOUT and talk:WP:LEAD first. By the way, I much MUCH' prefer the original lead, before it was edited. Mikker (...) 00:57, 13 December 2006 (UTC)

GetAgrippa, In all honesty, I can only believe you haven't read the old introduction recently, because your statements about it do not seem to reflect what it was. Let me quote the opening of the last version before my edits: "In biology, evolution is change in the heritable traits of a population over successive generations (influenced by natural selection, genetic drift, or gene flow). The (genetic) variation in the units of heredity ("shifts in the allele frequency of genes") and interactions with the environment that increase the survival and reproductive success of this variation is natural selection and it plays a major role in adaptations (and exaptations)."

This is a list of jargon terms, with no explanations. It's asking the uninitiated reader to open, what, say, 10 subarticles, if we ignore the relatively well-known terms like "genes" and "population" just to get through the first two sentences. This isn't a simple explanation, this is a see also section with connecting text, and I'm at a complete loss to understand why you think this is at all simple. Adam Cuerden talk 00:40, 13 December 2006 (UTC)

I think that Adam Cuerden has made a massive improvement over the previous jargon-laden introduction. However, I would favor at least breaking it into paragraphs, and having one initial paragraph that is very short, maybe no more than 3 or 4 sentences long. Maybe we are not allowed to have some sort of heading this lead into two, but at least we can make them paragraphs. I however would personally like to see the policy changed so that we had something very short, like an abstract, then followed by an introduction, and then the body. However strictly speaking this does not meet the current rules. At least, let's have paragraphs!--Filll 00:54, 13 December 2006 (UTC)
In addition, I would suggest shorter less complex sentences. --Filll 00:56, 13 December 2006 (UTC)

I think that the direction we are moving is the right direction. I for one think that moving back to the previous introduction would be a bad mistake. I just think it should be formatted slightly differently. I would be glad to do it for you, but I do not want to step on any toes.--Filll 01:01, 13 December 2006 (UTC) Yes, I'm afraid I do love my clauses, don't I? Still, at least it's a start. I'm not saying we should let it stand as I wrote it, but I do think it's better than what came before, which does count for something on a Wiki, surely. By all means, go forth and edit! Adam Cuerden talk 01:04, 13 December 2006 (UTC)

Well I gave it a shot but I think it needs more work. I think if we divided it up a bit more with section headings it would help. I think the wording is still awkward too, I am afraid. I would like to just direct anyone interested in controversy right off the bat to the evolution creationism controversy article if I can find the right wording. --Filll 01:49, 13 December 2006 (UTC)
Weel, that's the point of editing. It'll sort itself out in time. I would like to lose all the bullet points, though. Adam Cuerden talk 01:55, 13 December 2006 (UTC)


An improvement indeed; however there is still a sense that the definitions need to cover every possible scenario. These two sentences fail all of the readability test:

“Since some traits or collections of traits allow an organism to have more offspring than an organism lacking them, and genes are passed on by reproduction, those that increase reproductive success are more likely to be passed on in comparison to those genes that cause neutral or relatively unfavorable traits. Therefore, the number of organisms with these traits will tend to increase with each passing generation, unless conditions change so as to make them no longer favorable.

I've bolded where it seemed to be "covering all possible scenerios".

What is wrong with, “ In general, Evolution can be described as…. Will they attack you for that phrase so early in the article?

The first paragraph needs to be as much organizational as informative; guiding your readers into the topic rather than bashing them over the heads with it with an endless sentence of this nature. . If it can’t be cleaned up … could you please change this intro line from:

For a non-technical introduction to the topic, please see Introduction to evolution. To: For a comprehensible introduction to the topic please see Introduction to evolution. --Random Replicator 02:09, 13 December 2006 (UTC)

I agree. One does NOT need to cover every possible special case in the introduction. One has to give the big picture. And the sentences should be short. No more than one comma per sentence is a good goal. And paragraphs that are meaningful !! if you do not like the bullets something else can be tried, but it is a desperate attempt to try to put some structure in this basically incomprehensible morass...--Filll 02:18, 13 December 2006 (UTC)
I would mention Gene flow rather than Founder effect. Gene flow also includes hybridization and HGT. Founder effect is special case of Gene flow or Genetic drift as the article now reads further down. I moved HGT to Gene flow section as this is consistent with Gene flow article. Although it is interesting how the Founder effect has influenced present population of American Indians with a number of genetic anomalies. GetAgrippa 02:15, 13 December 2006 (UTC)

Yes. It's probably a little too precise - though I do think the "genes are passed on by reproduction" bit is useful insofar as it's an important step in the logical chain as to why an increased opportunity to reproduce results in those genes that caused the increased opportunity to be found more frequently in the next generation. Eh, well. I'm off to bed - should've been hours ago. I'll poke a bit at whatever takes shape overnight. In any case, I can bask in the knowledge that at least we're finally doing something about the introduction. Adam Cuerden talk 02:29, 13 December 2006 (UTC)

This is really great, much more accessible! I think that the second paragrapgh on natural seleciton goes into a bit too much detail for an introductory section, and make it take too long to get to speciation. It would probably improve the intro if it were taken out. It's not really the place to cover the different forms of selection. Thanks for all the hard work!--Margareta 06:04, 13 December 2006 (UTC)

What the heck, I'll try it myself and we can see how it looks.--Margareta 06:06, 13 December 2006 (UTC)


It still looks too baggy and needs formatting in my opinion. Maybe some shorter sentences too. It is so long. I would favor a short 4 or 5 sentence "abstract"-type paragraph, then a more leisurely introduction. I would prefer a boundary or section heading marking the edge between these two, but some people are hung up on the MOS here so it might not be permitted. At least a paragraph break. Some signal to the reader that "you dont have to read all this stuff, just here is far enough to get an idea of what is in the article".--Filll 06:09, 13 December 2006 (UTC)
Need to mention "stasis" of populations and perhaps the role of extinctions in diversity and adaptations. The intro is improving. Oh yeah, I'd drop the Founder effect as it is covered in detail later in the article or mention it as a special case or example of genetic drift or give an example of genetic drift like facial patterns in humans. GetAgrippa 13:19, 13 December 2006 (UTC) Oops! stasis and extinction is mentioned later in article. Forget about it!!!GetAgrippa 18:25, 13 December 2006 (UTC)

Avoid putting 'survival' on equal footing with 'reproduction'

There is a common misunderstanding (which I think many biologists shared in earlier times), on the effect that evolution in itself should further stronger, more agile, more intelligent, or in similar respects 'better' individuals. Nowadays (thanks to Richard Dawkins and others) I believe most agree that (long term) gene reproductive success is the only selective factor on an individual level. Thus, sometimes selection will favour stronger individuals, but other times weaker ones; sometimes individual survival will be be favoured, but other times (as in the 'suicide' of mating drones) an abrupt early death is favoured, or (as with the sessile tunicates) less intelligence.

There have been some unpracticed editors adding things implying favouring the strongest. This is probably due to such misunderstandings. I am slightly worried when an insightful 'editor pro' like User:GetAgrippa adds and survival on a number of places, where primarily only reproductive success is of interest (and better ability to survive only has a secondary interest, to the extent this furthers reproductive success). I think this risks to increase the layman misunderstanding; and therefore, I'd like GetAgrippa to reconsider and preferrably remove these additions.--JoergenB 14:10, 13 December 2006 (UTC)

I added it to stay consistent with the Natural selection article (your comments come close to snide!). I agree the bottom line is reproductive success. An example I've mentioned earlier is the evolution of tetrodotoxin resistance in garter snakes to venom produced by newts in their diet. The change increases resistance to the toxin, but the alteration in channel activity gives them slower reflexes and makes them more prone to predators. I think you do make a good point that natural selection does not create perfect, purposeful, or more complex structures. GetAgrippa 15:14, 13 December 2006 (UTC)

All right; I'll compare with natural selection, too.--JoergenB 15:45, 13 December 2006 (UTC)
I think you do make a good point that natural selection does not create perfect, purposeful, or more complex structures. This statement is true but there is no denying that organisms and ecosystems have become more complex. Science. 2006. 314:5803. pp 1289-91.Abundance Distrubtions Imply Elevated Complexity of Post-Paleozoic Marine Ecosystems.GetAgrippa 16:56, 13 December 2006 (UTC)

Introduction section again

Lead

Fused Gene Flow and population structure with Genetic Drift

Entropy and life

Lead section rewritten again

Evolution, compexity, devolution

Entropy and life

Restructuring

Layout seems to be broken

New fact and theory section

Slrubenstein's fact and theory section

Invitation to compare proposed leads to article

Invitation to compare various Fact and Theory sections

Rearrangement of sections

Inferior creatures?

Intro

The Rest of the Article

Notes vs. Refs

Cooperation as 3rd Principle

Straightening out Controverises

Fact vs. Theory - Compromise?

Cooperation in Evolution

Starting to understand why evolution is losing out to creationists

Fact vs. Theory

UCD

A preliminary inspection of the present fact and theory section

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