User:C6541/molecules
From Wikipedia, the free encyclopedia
Molecules I have made and are currently in use unless otherwise noted.
I would appreciate a comment or concern by clicking here!
| Molecule Images | |||
|---|---|---|---|
| 3D Image | Article/Name | 2D Image | Article/Name |
 |
Dextrorphan 3D Molecule |  |
Mexacarbate 2D Molecule |
 |
Noscapine 3D Molecule |  |
Triclofos 2D Molecule |
 |
Papaverine 3D Molecule |  |
Cyclohexylacetone 2D Molecule |
 |
Ethylphenidate 3D Molecule |  |
2C-TFM Molecule |
 |
Apomorphine 3D Molecule |  |
2C-B Molecule |
 |
1,3-Butanediol 3D Molecule |  |
4-Methylephedrine 2D Molecule (mephedrone metabolite) |
| Codeine 3D Molecule |  |
Prenylamine 2D Molecule | |
 |
Lidocaine 3D Molecule |  |
2CBCB-NBOMe 2D Molecule |
 |
4-Methyl-aminorex 3D Molecule |  |
2C-C-NBOMe 2D Molecule |
 |
2C-T-2 3D Molecule |  |
2CBFly-NBOMe 2D Molecule |
 |
LSA 3D Molecule |  |
2C-TFM-NBOMe 2D Molecule |
 |
Levomethamphetamine 3D Molecule |  |
25I-NBMD 2D Molecule |
 |
Propylhexedrine 3D Molecule |  |
25I-NBF 2D Molecule |
 |
Lisdexamfetamine 3D Molecule |  |
TFMFly 2D Molecule |
 |
Bromantane 3D Molecule |  |
DSP-4 2D Molecule |
 |
Noscapine 3D Molecule |  |
Vilazodone 2D Molecule |
 |
MDPV 3D Molecule |  |
Norpropylhexedrine 2D Molecule |
 |
Benzphetamine 3D Molecule | ||
 |
Binospirone 3D Molecule | ||
 |
Oxymetazoline 3D Molecule | ||
 |
Desoxypipradrol 3D Molecule | ||
 |
4-MMC 3D Molecule | ||
 |
Cyclobenzaprine 3D Molecule | ||
 |
JWH-018 3D Molecule | ||
 |
Dihydromorphine 3D Molecule (ball and sticks) | ||
 |
Thebaine 3D Molecule (ball and sticks) | ||
 |
4-Methyl-AET 3D Molecule (ball and sticks) | ||
 |
ALD-52 3D Molecule (ball and sticks) | ||
 |
2C-C-NBOMe 3D Molecule (ball and sticks) | ||
 |
Phenibut 3D Molecule (ball and sticks) | ||
 |
Methoxetamine 3D Molecule (ball and sticks) | ||
 |
Norpropylhexedrine 3D Molecule |
| How I make them |
|---|
| Process for creating the 3D molecules is as follows: |
| 1. Create 3D molecule in Ghemical running on Linux based on chemical 2D skeleton |
| 2. Use auto-tool to properly arrange the molecule |
| 3. Check molecular weight and empirical formula with Ghemical to ensure proper creation |
| 4. Using OpenBabel export in to a PDB (Protein Data Bank) file |
| 5. Save the project and close Ghemical |
| 6. Using QuteMol running through WINE open the PDB file and animate it |
| 7. Save the GIF file |
| 8. Upload the GIF animated molecule to Wikipedia Commmons and edit the drug article to display it. |
| Process for creating the 2D molecules is as follows: |
| 1. Set BKChem settings following WikiProject Chemistry's structure drawing guidelines |
| 2. Draw molecule in BKChem |
| 3. Export molecule as SVG |