A1CF

Protein-coding gene in the species Homo sapiens From Wikipedia, the free encyclopedia

APOBEC1 complementation factor is a protein that in humans is encoded by the A1CF gene.[5][6][7]

PDBOrtholog search: PDBe RCSB
AliasesA1CF, ACF, ACF64, ACF65, APOBEC1CF, ASP, APOBEC1 complementation factor
Quick facts Available structures, PDB ...
A1CF
Available structures
PDBOrtholog search: PDBe RCSB
Identifiers
AliasesA1CF, ACF, ACF64, ACF65, APOBEC1CF, ASP, APOBEC1 complementation factor
External IDsOMIM: 618199; MGI: 1917115; HomoloGene: 16363; GeneCards: A1CF; OMA:A1CF - orthologs
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_001081074
NM_001365078

RefSeq (protein)

NP_001074543
NP_001352007

Location (UCSC)Chr 10: 50.8 – 50.89 MbChr 19: 31.85 – 31.93 Mb
PubMed search[3][4]
Wikidata
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Gene

Alternative splicing occurs at this locus and three full-length transcript variants, encoding three distinct isoforms, have been described. Additional splicing has been observed but the full-length nature of these variants has not been determined.[7]

Function

Mammalian apolipoprotein B mRNA undergoes site-specific C to U deamination, which is mediated by a multi-component enzyme complex containing a minimal core composed of APOBEC1 and a complementation factor encoded by this gene.[8] The gene product has three non-identical RNA recognition motifs and belongs to the hnRNP R family of RNA-binding proteins. It has been proposed that this complementation factor functions as an RNA-binding subunit and docks APOBEC1 to deaminate the upstream cytidine. Studies suggest that the protein may also be involved in other RNA editing or RNA processing events.[7]

Its deletion results in lethality in mice.[9]

Interactions

A1CF has been shown to interact with APOBEC1,[10][11] CUGBP2,[12] and SYNCRIP.[13][10]

References

Further reading

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