Glycine–tRNA ligase

Protein-coding gene in the species Homo sapiens From Wikipedia, the free encyclopedia

Glycine–tRNA ligase also known as glycyl-tRNA synthetase is an enzyme that in humans is encoded by the GARS1 gene.[5][6][7]

AliasesGARS1, CMT2D, DSMAV, GlyRS, HMN5, SMAD1, glycyl-tRNA synthetase, GARS, glycyl-tRNA synthetase 1, HMN5A, SMAJI
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Quick facts GARS1, Identifiers ...
GARS1
Identifiers
AliasesGARS1, CMT2D, DSMAV, GlyRS, HMN5, SMAD1, glycyl-tRNA synthetase, GARS, glycyl-tRNA synthetase 1, HMN5A, SMAJI
External IDsOMIM: 600287; MGI: 2449057; GeneCards: GARS1
Available structures
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Enzyme activity
EC #BRENDAExPASyKEGGMetaCyc
6.1.1.14
Orthologs
DatabasesNCBI: entry; OMA: entry
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_002047
NM_001316772

NM_180678

RefSeq (protein)

NP_001303701
NP_002038

NP_851009

Location (UCSC)Chr 7: 30.58 – 30.63 MbChr 6: 55.01 – 55.06 Mb
PubMed search[3][4]
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Function

This gene encodes glycyl-tRNA synthetase, one of the aminoacyl-tRNA synthetases that charge tRNAs with their cognate amino acids. The encoded enzyme is an (alpha)2 dimer which belongs to the class II family of tRNA synthetases.[7]

Reaction

In enzymology, a glycine–tRNA ligase (EC 6.1.1.14) is an enzyme that catalyzes the chemical reaction

ATP + glycine + tRNAGly AMP + diphosphate + glycyl-tRNAGly

The 3 substrates of this enzyme are ATP, glycine, and tRNAGly, whereas its 3 products are AMP, diphosphate, and glycyl-tRNAGly.

This enzyme belongs to the family of ligases, to be specific those forming carbon–oxygen bonds in aminoacyl-tRNA and related compounds. The systematic name of this enzyme class is glycine:tRNAGly ligase (AMP-forming). Other names in common use include glycyl-tRNA synthetase, glycyl-transfer ribonucleate synthetase, glycyl-transfer RNA synthetase, glycyl-transfer ribonucleic acid synthetase, and glycyl translase. This enzyme participates in glycine, serine and threonine metabolism and aminoacyl-tRNA biosynthesis.

Interactions

Glycyl-tRNA synthetase has been shown to interact with EEF1D.[8] Mutant forms of the protein associated with peripheral nerve disease have been shown to aberrantly bind to the transmembrane receptor proteins neuropilin 1[9] and Trk receptors A-C.[10]

Clinical relevance

Glycyl-tRNA synthetase has been shown to be a target of autoantibodies in the human autoimmune diseases, polymyositis or dermatomyositis.[7]

The peripheral nerve diseases Charcot-Marie-Tooth disease type 2D (CMT2D) and distal spinal muscular atrophy type V (dSMA-V) have been liked to dominant mutations in GARS.[11][12] CMT2D usually manifests during the teenage years, and results in muscle weakness predominantly in the hands and feet.[13] Two mouse models of CMT2D have been used to better understand the disease, identifying that the disorder is caused by a toxic gain-of-function of the mutant glycine-tRNA ligase protein.[14] The CMT2D mice display peripheral nerve axon degeneration [15][16] and defective development[17] and function[18] of the neuromuscular junction.

References

Further reading

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