Holophagae
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Class of bacteria
| Holophagae | |
|---|---|
Scientific classification  | |
| Domain: | Bacteria |
| Kingdom: | Pseudomonadati |
| Phylum: | Acidobacteriota |
| Class: | Holophagae Fukunaga et al. 2008[1] |
| Type genus | |
| Holophaga Liesack et al. 1995 | |
| Orders[2] | |
| Synonyms | |
| |
Holophagae is a class of Acidobacteriota.[1]
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature[2] and National Center for Biotechnology Information (NCBI).[3] Numbered orders do not yet have any cultured representatives.
| 16S rRNA based phylogeny[4] | 16S rRNA based LTP_10_2024[5][6][7] | 120 marker proteins based GTDB 10-RS226[8][9][10] | |||||||||||||||
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See also
References
- 1 2 Fukunaga Y, Kurahashi M, Yanagi K, Yokota A, Harayama S. (2008). "Acanthopleuribacter pedis gen. nov., sp. nov., a marine bacterium isolated from a chiton, and description of Acanthopleuribacteraceae fam. nov., Acanthopleuribacterales ord. nov., Holophagaceae fam. nov., Holophagales ord. nov. and Holophagae classis nov. in the phylum "Acidobacteria"". Int J Syst Evol Microbiol. 58 (Pt 11): 2597–2601. doi:10.1099/ijs.0.65589-0. PMID 18984699.
- 1 2 Holophagae in LPSN; Freese, H. M.; Meier-Kolthoff, J. P.; Sardà Carbasse, J.; Afolayan, A. O.; Göker, M. (29 October 2025). "TYGS and LPSN in 2025: a Global Core Biodata Resource for genome-based classification and nomenclature of prokaryotes within DSMZ Digital Diversity". Nucleic Acids Research. 53: D1–D12. doi:10.1093/nar/gkaf1110.
- ↑ Schoch CL; et al. "Holophagae". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2025-06-05.
- ↑ Dedysh SN, Yilmaz P. (2018). "Refining the taxonomic structure of the phylum Acidobacteria". Int J Syst Evol Microbiol. 68 (12): 3796–3806. doi:10.1099/ijsem.0.003062. PMID 30325293. S2CID 53502177.
- ↑ "The LTP". Retrieved 10 December 2024.
- ↑ "LTP_all tree in newick format". Retrieved 10 December 2024.
- ↑ "LTP_10_2024 Release Notes" (PDF). Retrieved 10 December 2024.
- ↑ "GTDB release 10-RS226". Genome Taxonomy Database. Retrieved 1 May 2025.
- ↑ "bac120_r226.sp_label". Genome Taxonomy Database. Retrieved 1 May 2025.
- ↑ "Taxon History". Genome Taxonomy Database. Retrieved 1 May 2025.
Prokaryotes: Bacteria classification | |||||||||||||||||||||||||||
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| Holophagae | |
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