Hsp104

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Hsp104 is a heat-shock protein. It is known to reverse toxicity of mutant α-synuclein, TDP-43, FUS, and TAF15 in yeast cells.[1] Conserved in prokaryotes (ClpB), fungi, plants and as well as animal mitochondria, there is yet to see hsp104 in multicellular animals. Hsp104 is classified as a. AAA+ ATPases and a subgroup of Hsp100/Clp, because of the usage of Atp hydrolysis for structural modulation of other proteins.[2] Hsp104 is not needed for normal cell growth but when exposed to stress there is an increasing amount. Removing the aggregates without the hsp104 is insufficient there highlighting the importance of this heat shock protein and its interactions.[3]

Hsp104 monomer is composed of two NBDs (Nucleotide Binding Sites) NBD1 and NBD2 which communicate through allosteric communication. Located on the C-terminus of NBD1 there are around 125 residues that link both NBDs. In hsp104 NBD1 is where ATP hydrolysis occurs, NBD2 C-terminus is shown to express the configuration of the structure by nucleotide-dependent hexamerazation. These NBDs have diaphragms, which are conserved loops that interact in the middle of the channel inside the chaperone by coupling the ATP hydrolysis and polypeptide transport. Coupling of this reaction is needed as without the coupling it is an energetically unfavorable reaction.[4] These conserved loops contain conserved Tyr residues that are crucial for binding to substrates.[5]

The Hsp104 homohexamer (Figure A) is a part of an unfolding/threading mechanism that aggregates pass through and single polypeptides are extracted. Presence of ATP, ADP allows the formation of the Hsp104 monomers to homohexamer complexes. Through the hexamer complex, the monomers communicate and make ATPhydrolysis from hsp104 hexamerization. This ATP hydrolysis allows hsp104 to interact with substrates.[2]  

Figure A. Hsp104 Hexamer is encountering an aggregate with a chaperone it is able to extract the single polypeptides. For translocation to happen ATP hydrolysis is occurring and threading is happening to unfold proteins. Figure B. Demonstrates the crowbar model that changes shape due to conformational changes caused by the binding or hydrolysis of ATP breaking the protein aggregate. This is done in the middle of Hsp104 and later the released polypeptides can be refolded.[3]
A. Is the monomer of Hsp 104 which is composed of the N-terminal domain. Then NBD1 is shown next and is connected to the NBD2 through the linkage of small domains and middle regions which would be the Tyr residuals. Lastly, you have your C-terminal domain. B. This is the homohexamers composed of six monomers of Hsp104 and this is where they are able to deal with stressors and interact with ATP hydrolysis.[2]

Expression inducers

Interactions

References

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