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LRRC24

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AliasesLRRC24, LRRC14OS, leucine rich repeat containing 24
End144,527,033 bp[1]
LRRC24
Identifiers
AliasesLRRC24, LRRC14OS, leucine rich repeat containing 24
External IDsMGI: 3605040; HomoloGene: 86785; GeneCards: LRRC24; OMA:LRRC24 - orthologs
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_001024678

NM_198119

RefSeq (protein)

NP_001019849

NP_932787

Location (UCSC)Chr 8: 144.52 – 144.53 MbChr 15: 76.6 – 76.61 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Leucine rich repeat containing 24 is a protein that, in humans, is encoded by the LRRC24 gene.[5] The protein is represented by the official symbol LRRC24, and is alternatively known as LRRC14OS.[6] The function of LRRC24 is currently unknown. It is a member of the leucine-rich repeat (LRR) superfamily of proteins.

In humans, LRRC24 is located on Chromosome 8 (8q24.3). The gene spans approximately 4.66 kb on the opposite strand.[5] LRRC24 is composed of five exons, and only a single gene isoform has been identified.[5]

GeneCards Genomic View for LRRC24 gene[6]

Protein

General features

LRRC24 is a transmembrane protein of unknown function. Human LRRC24 consists of 513 amino acids including a 23 amino acid signal peptide.[5][7] The mature form of the protein has a molecular weight of 52.9 kDa.[8] The isoelectric point of the mature human protein is 7.98[9] The protein is largely composed of alpha helices.[10]

Domains

LRRC24 is a single-pass transmembrane protein. The protein consists of six leucine-rich repeats and an immunoglobulin-like domain.[5][11]

Feature Position(s) Description
Signal Peptide 1-23 [12]
Domain 24-50 Leucine rich repeat N-terminal domain (LRRNT)[13][14]
Repeat 51-72 Leucine rich repeat 1 (LRR 1)[13][14]
Repeat 75-96 LRR 2[13][14]
Repeat 99-120 LRR 3[13][14]
Repeat 123-144 LRR 4[13][14]
Repeat 147-168 LRR 5[13][14]
Repeat 171-192 LRR 6[13][14]
Domain 204-257 Leucine rich repeat C-terminal domain (LRRCT)[13][14]
Domain 259-364 Immunoglobulin-like domain (Ig-like)[13][14]
Domain 406-426 Transmembrane domain (TMEM)[15]
Motif 427-436 Arginine-rich motif (ARM)[13]
Diagram of LRRC24. Domains are labelled as predicted;[16] grey markers represent confirmed N-linked glycosylated arginine residues (N334 & N363); red marker represents confirmed phorphorylated tyrosine (Y509); Figure created using Prosite MyDomains-Image Creator[17]

Localization

LRRC24 is a secreted protein as is evidenced by the presence of a signal peptide. The structure of the protein suggests that it localizes to the cell membrane.

Homology

LRRC24 is conserved in Euteleostomi with the exception of Aves.[5][18] Also, based on sequence homology analysis, distant orthologs of LRRC24 are also conserved in invertebrates of phyla Mollusca and Arthropoda.[5] No human paralogs of LRRC24 have been identified.

An unrooted phylogenetic tree of LRRC24 orthologs generated using Phylip’s DrawTree[16] and ClustalW.[9][19]

Expression

Microarray and in situ hybridization experiments suggest LRRC24 is primarily expressed within the brain.[20][21][22] Expression is observed to be especially high within the midbrain, neocortex, and tissues of the limbic system, including the hypothalamus and hippocampal formation.[20][22][23]

Interactions

Clinical significance

References

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