List of Hot 100 number-one singles of 2016 (Japan)
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The following is a list of number-one singles on the Billboard Japan Hot 100 chart in 2016.
Chart history
| Issue date | Song | Artist(s) | Ref. |
|---|---|---|---|
| January 4 | "Christmas Song" | Back Number | [1] |
| January 11 | "Torisetsu" | Kana Nishino | [2] |
| January 18 | "Boymen Ninja" | Boys and Men | [3] |
| January 25 | "Hane" | Koshi Inaba | [4] |
| February 1 | "Hikari no Shizuku" | NEWS | [5] |
| February 8 | "Ageha" | Generations from Exile Tribe | [6] |
| February 15 | "Wanna be!" | Boys and Men | [7] |
| February 22 | "Tragedy" | KAT-TUN | [8] |
| February 29 | "Letters to Tomorrow" | Aoi Teshima | [9] |
| March 7 | "Fukkatsu Love" | Arashi | [10] |
| March 14 | "Unlock" | KAT-TUN | [11] |
| March 21 | "Kimi wa Melody" | AKB48 | [12] |
| March 28 | "Gravity" | Kis-My-Ft2 | [13] |
| April 4 | "Harujion ga Sakukoro" | Nogizaka46 | [14] |
| April 11 | "Chicken Line" | SKE48 | [15] |
| April 18 | "Silent Majority" | Keyakizaka46 | [16] |
| April 25 | "74 Okubun no 1 no Kimi e" | HKT48 | [17] |
| May 2 | "Gyakuten Winner" | Johnny's West | [18] |
| May 9 | "Amagami Hime" | NMB48 | [19] |
| May 16 | "Shouri no Hi made" | Sexy Zone | [20] |
| May 23 | "Maji SUNSHINE" | Hey! Say! JUMP | [21] |
| May 30 | "I Seek/Daylight" | Arashi | [22] |
| June 6 | "Boku no Namae wo" | back number | [23] |
| June 13 | "Tsubasa wa Iranai" | AKB48 | [24] |
| June 20 | "Beautiful World" | V6 | [25] |
| June 27 | "L.U.V" | BTOB | [26] |
| July 4 | "Hi-Fi☆Days" | The Cinderella Project | [27] |
| July 11 | "Namida" | Generations from Exile Tribe | [28] |
| July 18 | "Tsumi to Natsu" | Kanjani Eight | [29] |
| July 25 | "Koi wo Shiranai Kimi e" | NEWS | [30] |
| August 1 | "Bara to Taiyo" | KinKi Kids | [31] |
| August 8 | "Hadashi de Summer" | Nogizaka46 | [32] |
| August 15 | "Boku wa Inai" | NMB48 | [33] |
| August 22 | "Sekai ni wa Ai Shika Nai" | Keyakizaka46 | [34] |
| August 29 | "Kin no Ai, Gin no Ai" | SKE48 | [35] |
| September 5 | "Sha la la☆Summer Time" | Kis-My-Ft2 | [36] |
| September 12 | "Love Trip" | AKB48 | [37] |
| September 19 | "Saikō Kayo" | HKT48 | [38] |
| September 26 | "Power of the Paradise" | Arashi | [39] |
| October 3 | "Zenzenzense" | Radwimps | [40] |
| October 10 | "Dumb & Dumber" | iKon | [41] |
| October 17 | "Another Starting Line" | Hi-Standard | [42] |
| October 24 | "Koi" | Gen Hoshino | [43] |
| October 31 | [44] | ||
| November 7 | "Fantastic Time" | Hey! Say! JUMP | [45] |
| November 14 | "PPAP (Pen-Pineapple-Apple-Pen)" | Pikotaro | [46] |
| November 21 | "Sayonara no Imi" | Nogizaka46 | [47] |
| November 28 | "High Tension" | AKB48 | [48] |
| December 5 | "Koi" | Gen Hoshino | [49] |
| December 12 | "Futari Saison" | Keyakizaka46 | [50] |
| December 19 | "Koi" | Gen Hoshino | [51] |
| December 26 | [52] |