ORF3c

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OrganismSARS-CoV-2
SymbolORF3c
StructuresSwiss-model
ORF3c
Identifiers
OrganismSARS-CoV-2
SymbolORF3c
UniProtP0DTG1
Search for
StructuresSwiss-model
DomainsInterPro

ORF3c is a gene found in coronaviruses of the subgenus Sarbecovirus, including SARS-CoV and SARS-CoV-2. It was first identified in the SARS-CoV-2 genome and encodes a 41 amino acid non-structural protein of unknown function.[1][2][3] It is also present in the SARS-CoV genome, but was not recognized until the identification of the SARS-CoV-2 homolog.[4]

There has been significant confusion in the scientific literature around the nomenclature used for the accessory proteins of SARS-CoV-2, especially several overlapping genes with ORF3a.[4] The predicted protein product of the ORF3c gene has at least once been referred to as "3b protein",[5] but it is not to be confused with the non-homologous gene ORF3b.[4] It has also been described under the names ORF3h[2] and ORF3a.iORF1.[6] The recommended nomenclature for SARS-CoV-2 uses the term ORF3c for this gene.[4]

Comparative genomics

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