The lichen has a light to dark grey thallus up to 10 cm (4 in) in diameter comprising lobes with somewhat rounded tips that measure 3–7 mm (0.1–0.3 in) wide. Pseudocyphellae are sparse and minute (less than 0.2 mm in diameter), and are evenly distributed on the thallus surface. The lichen does make any vegetative propagules–lobulae, squamules, soredia, nor isidia. The medulla is white, while the thallus underside is chestnut or black. The cortex contains atranorin, while the medulla has gyrophoric acid. The conidia are threadlike (filiform), measuring 9–15 μm.[1] The type specimen did not have apothecia, and so ascospore measurements were not given. They were later determined to be ellipsoid in shape, typically measuring 15–21 by 9–13 μm, with an epispore (outer spore covering) of 1–1.5 μm.[2]
Punctelia jujensis was reported from Brazil in 2010.[2]