U7 small nuclear RNA
RNA family
From Wikipedia, the free encyclopedia
The U7 small nuclear RNA (U7 snRNA) is an RNA molecule and a component of the small nuclear ribonucleoprotein complex (U7 snRNP). The U7 snRNA is required for histone pre-mRNA processing.
Quick facts Identifiers, Symbol ...
| U7 small nuclear RNA | |
|---|---|
Predicted secondary structure and sequence conservation of U7 | |
| Identifiers | |
| Symbol | U7 |
| Rfam | RF00066 |
| Other data | |
| RNA type | Gene; snRNA |
| Domain | Eukaryota |
| SO | SO:0000274 |
| PDB structures | PDBe |
Close
The 5' end of the U7 snRNA binds the HDE (histone downstream element), a conserved purine-rich region, located 15 nucleotides downstream the histone mRNA cleavage site.[1][2] The binding of the HDE region by the U7 snRNA, through complementary base-pairing, is an important step for the future recruitment of cleavage factors during histone pre-mRNA processing.[3]
See also
References
- Spycher C, Streit A, Stefanovic B, Albrecht D, Koning TH, Schümperli D (1994). "3' end processing of mouse histone pre-mRNA: evidence for additional base-pairing between U7 snRNA and pre-mRNA". Nucleic Acids Res. 22 (20): 4023–4030. doi:10.1093/nar/22.20.4023. PMC 331885. PMID 7937126.
- Mowry KL, Steitz JA (1987). "Identification of the human U7 snRNP as one of several factors involved in the 3' end maturation of histone premessenger RNA's". Science. 238 (4834): 1682–1687. Bibcode:1987Sci...238.1682M. doi:10.1126/science.2825355. PMID 2825355.
- Marzluff, William F.; Wagner, Eric J.; Duronio, Robert J. (2008). "Metabolism and regulation of canonical histone mRNAs: life without a poly(A) tail". Nature Reviews Genetics. 9 (11): 843–854. doi:10.1038/nrg2438. PMC 2715827. PMID 18927579.
Further reading
[1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] [61] [62] [63] [64] [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81]
External links
- Page for U7 small nuclear RNA at Rfam
- The uRNA database Archived 2011-07-20 at the Wayback Machine
- Voigt T, Meyer K, Baum O, Schümperli D (2010). "Ultrastructural changes in diaphragm neuromuscular junctions in a severe mouse model for Spinal Muscular Atrophy and their prevention by bifunctional U7 snRNA correcting SMN2 splicing". Neuromuscul Disord. 20 (11): 744–752. doi:10.1016/j.nmd.2010.06.010. PMID 20832308. S2CID 11835561.
- Ruepp MD, Vivarelli S, Pillai RS, Kleinschmidt N, Azzouz TN, Barabino SM, Schümperli D (2010). "The 68 kDa subunit of mammalian cleavage factor I interacts with the U7 small nuclear ribonucleoprotein and participates in 3'-end processing of animal histone mRNAs". Nucleic Acids Res. 38 (21): 7637–7650. doi:10.1093/nar/gkq613. PMC 2995043. PMID 20634199.
- Geib T, Hertel KJ (2009). Valcarcel, Juan (ed.). "Restoration of full-length SMN promoted by adenoviral vectors expressing RNA antisense oligonucleotides embedded in U7 snRNAs". PLOS ONE. 4 (12) e8204. Bibcode:2009PLoSO...4.8204G. doi:10.1371/journal.pone.0008204. PMC 2781471. PMID 19997596.
- Godfrey AC, White AE, Tatomer DC, Marzluff WF, Duronio RJ (2009). "The Drosophila U7 snRNP proteins Lsm10 and Lsm11 are required for histone pre-mRNA processing and play an essential role in development". RNA. 15 (9): 1661–1672. doi:10.1261/rna.1518009. PMC 2743060. PMID 19620235.
- Yang XC, Torres MP, Marzluff WF, Dominski Z (2009). "Three proteins of the U7-specific Sm ring function as the molecular ruler to determine the site of 3'-end processing in mammalian histone pre-mRNA". Mol Cell Biol. 29 (15): 4045–4056. doi:10.1128/MCB.00296-09. PMC 2715809. PMID 19470752.
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- Goyenvalle A, Vulin A, Fougerousse F, Leturcq F, Kaplan JC, Garcia L, Danos O (2004). "Rescue of dystrophic muscle through U7 snRNA-mediated exon skipping". Science. 306 (5702): 1796–1799. Bibcode:2004Sci...306.1796G. doi:10.1126/science.1104297. PMID 15528407. S2CID 9359783.
- Schümperli D, Pillai RS (2004). "The special Sm core structure of the U7 snRNP: far-reaching significance of a small nuclear ribonucleoprotein" (PDF). Cell Mol Life Sci. 61 (19–20): 2560–2570. doi:10.1007/s00018-004-4190-0. PMC 11924553. PMID 15526162. S2CID 5780814.
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- Brun C, Suter D, Pauli C, Dunant P, Lochmüller H, Burgunder JM, Schümperli D, Weis J (2003). "U7 snRNAs induce correction of mutated dystrophin pre-mRNA by exon skipping". Cell Mol Life Sci. 60 (3): 557–566. doi:10.1007/s000180300047. PMC 11138867. PMID 12737315. S2CID 42878523.
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