VTA1

Vacuolar protein sorting-associated protein VTA1 homolog is a protein that in humans is encoded by the VTA1 gene.^[5][6]

AliasesVTA1, C6orf55, DRG-1, DRG1, LIP5, My012, SBP1, HSPC228, vesicle trafficking 1, 6orf55

External IDsOMIM: 610902; MGI: 1913451; GeneCards: VTA1

PDBOrtholog search: PDBe RCSB

Chr.Chromosome 6 (human)^[1]

Quick facts Identifiers, Aliases ...

VTA1
Identifiers
Aliases	VTA1, C6orf55, DRG-1, DRG1, LIP5, My012, SBP1, HSPC228, vesicle trafficking 1, 6orf55
External IDs	OMIM: 610902; MGI: 1913451; GeneCards: VTA1
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 2LXL, 2LXM, 4TXP, 4TXQ, 4TXR, 4U7E
Gene location (Human) Chr. Chromosome 6 (human)[1] Band 6q24.1-q24.2 Start 142,147,162 bp[1] End 142,224,685 bp[1]
Gene location (Mouse) Chr. Chromosome 10 (mouse)[2] Band 10|10 A2 Start 14,530,499 bp[2] End 14,581,304 bp[2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in ganglionic eminence pancreatic epithelial cell amniotic fluid deltoid muscle ventricular zone tibialis anterior muscle islet of Langerhans vastus lateralis muscle skin of arm mucosa of ileum Top expressed in zygote medial ganglionic eminence secondary oocyte genital tubercle neural layer of retina tail of embryo granulocyte primary oocyte dentate gyrus of hippocampal formation granule cell right kidney More reference expression data BioGPS n/a
Gene ontology Molecular function protein C-terminus binding protein binding Cellular component cytoplasm cytosol endosome endosome membrane extracellular exosome membrane nucleoplasm intracellular membrane-bounded organelle Biological process protein transport endosomal transport multivesicular body assembly viral life cycle multivesicular body sorting pathway ESCRT III complex disassembly macroautophagy transport Sources:Amigo / QuickGO
Orthologs Databases NCBI: entry; OMA: entry Species Human Mouse Entrez 51534 66201 Ensembl ENSG00000009844 ENSMUSG00000019868 UniProt Q9NP79 Q9CR26 RefSeq (mRNA) NM_016485 NM_001286371 NM_001286372 NM_025418 RefSeq (protein) NP_001273300 NP_001273301 NP_057569 NP_079694 Location (UCSC) Chr 6: 142.15 – 142.22 Mb Chr 10: 14.53 – 14.58 Mb PubMed search [3] [4]
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