As every remipede, Xibalbanus cozumelensis has an elongate body and has so eyes or pigmentation. The species ranges from 30 to 35 mm in length. There are up to 39 trunk segments. Most trunk segments have subrectangular tergites with rounded lateral margins.[2]
The head shield partly covers the first trunk segments and the proximal part of the head appendages. The first antennae are about 1/6 of the body length, they are biramous and bear aesthetascs and short setae. The antennae of the second pair are also biramous, however, they are much smaller and paddle-like. The gnathal edge of the mandibles consists of a molar process, an incisor process, and a lacinia mobilis. The labrum is prominent and bulbous.[2]
The first maxillae have seven segments. They are uniramous and robust, the second maxillae are longer and slender. The maxillipeds have eight segments are longer and more slender than the second maxillae. The limbs are natatory and biramous: the protopods are large, the exopods have three segments while the endopods have four. There are long plumose setae along the margins. The caudal rami are very slender.[2]