YcaO

Protein family From Wikipedia, the free encyclopedia

YcaO is a protein found in bacteria which is involved in the synthesis of thiazole/oxazole modified microcin antibiotics, such as bottromycin. YcaO performs ATP dependent cyclodehydration to form the oxazole and thiazole moieties of the microcin.[2][3][4]

Quick facts Identifiers, Symbol ...
YcaO-like family
Structure of the heterocyclase TruD. A YcaO-like protein from Prochloron sp. 06037A PDB entry 4bs9[1]
Identifiers
SymbolYcaO
PfamPF02624
InterProIPR003776
Available protein structures:
PDB  IPR003776 PF02624 (ECOD; PDBsum)  
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The YcaO name origin is from a gene naming rubric that was established from the bacterium Escherichia coli. If a gene has an unknown function, it was given a four-letter name starting with the letter Y and the next three letters are given based on the genomic location. [5]

Methyl coenzyme M reductase (MCR) or Coenzyme-B sulfoethylthiotransferase is a protein known in thioamidation (a posttranslational modification). A Ycao enzyme dependent on ATP is needed for MCR thioamidation as well as a sulfide source. YcaO enzymes are needed to catalyze the ATP-dependent backbone cyclodehydration of polar amino acids such as Cysteine, Serine, and Threonine to the correct thiazoline and (methyl) oxazoline Heterocycle.[6] The side chains of these amino acids can act as Nucleophiles. The Thiol group in cysteine and the hydroxyl group of serine and threonine are strong nucleophiles.

References

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