ZC3H11B
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| ZC3H11B | |||||||||||||||||||||||||||||||||||||||||||||||||||
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| Aliases | ZC3H11B, ZC3HDC11B, zinc finger CCCH-type containing 11B pseudogene, zinc finger CCCH-type containing 11B | ||||||||||||||||||||||||||||||||||||||||||||||||||
| External IDs | GeneCards: ZC3H11B; OMA:ZC3H11B - orthologs | ||||||||||||||||||||||||||||||||||||||||||||||||||
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| Wikidata | |||||||||||||||||||||||||||||||||||||||||||||||||||
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ZC3H11B also known as zinc finger CCCH-type containing protein 11B is a protein in humans that is encoded by the ZC3H11B gene.[3] The zc3h11b gene is located on chromosome 1, on the long arm, in band 4 section 1. This protein is also known as ZC3HDC11B. The zc3h11b gene is a total of 5,134 base pairs long, and the protein is 805 amino acids in length. The zc3h11b gene has 2 exons in total.
Structure
Domains
The ZC3H11B protein has three conserved domains. These include zinc finger domains, which are one of the most common or abundant protein groups often involved in regulation of cellular processes,[5] and coiled coil domains, which are a structurally conserved protein group present in all domains of life often involved in molecular spacing, vesicle tethering, and DNA recognition and cleavage.[6] Both the zinc finger and coiled coil domains are conserved in eukaryotes.
Zinc finger C3H1-type 1 is located from amino acids 2-29, and zinc finger C3H1-type 2 is located from amino acids 31–57.[7] Zinc finger C3H1-type proteins have been identified to interact with 3' region of untranslated mRNAs.[8] Coiled coil is located from positions 403-423 amino acids of the protein.[7]
Secondary
Currently the secondary structure of ZC3H11B is unknown.
The predicted secondary structure of ZC3H11B is a loop secondary structure composition,[9] which are irregular secondary structures that connect two secondary structural elements and are able to change the direction of polypeptide chain propagation.[10] The loop is predicted to be exposed for binding.[9]
Post-translational modifications
ZC3H11B is likely found in the nucleus.[11] ZC3H11B is predicted to undergo various phosphorylations, O-GlcNAcylations, glycations, and O-glycosylations.[12]
Example of sites predicted for phosphorylation, a mechanism in which a phosphoryl group is added and important in biological regulation and other cellular processes,[13] occur on 108, 149, 196,229, 290, and 330.[12] Example of sites predicted for O-GlcNAcylations, a mechanism in which an O-linked N-acetylglucosamine (O-GlcNAc) is added and important for regulation of cellular processes,[14] are 488, 744, and 732.[12] Examples of sites predicted for glycations, a mechanism in which glucose binds with proteins and lipids, are 140, 359, 669, and 776.[12] Example of sites predicted for O-glycosylation, a mechanism in which sugars or monosaccharides add to hydroxyl groups of proteins, occur on 179 and 386.[12]