Guanylate-binding protein
From Wikipedia, the free encyclopedia
| Guanylate-binding protein, N-terminal domain | |||||||||
|---|---|---|---|---|---|---|---|---|---|
structure of human guanylate binding protein-1 in nucleotide free form | |||||||||
| Identifiers | |||||||||
| Symbol | GBP | ||||||||
| Pfam | PF02263 | ||||||||
| Pfam clan | CL0023 | ||||||||
| InterPro | IPR015894 | ||||||||
| SCOP2 | 1dg3 / SCOPe / SUPFAM | ||||||||
| |||||||||
| Guanylate-binding protein, C-terminal domain | |||||||||
|---|---|---|---|---|---|---|---|---|---|
Structure of human guanylate binding protein-1 in nucleotide free form | |||||||||
| Identifiers | |||||||||
| Symbol | GBP_C | ||||||||
| Pfam | PF02841 | ||||||||
| InterPro | IPR003191 | ||||||||
| SCOP2 | 1dg3 / SCOPe / SUPFAM | ||||||||
| |||||||||
In molecular biology, the guanylate-binding proteins family is a family of GTPases that is induced by interferon (IFN)-gamma. GTPases induced by IFN-gamma (Interferon-inducible GTPase) are key to the protective immunity against microbial and viral pathogens. These GTPases are classified into three groups: the small 47-KD immunity-related GTPases (IRGs), the Mx proteins (MX1, MX2), and the large 65- to 67-kd GTPases. Guanylate-binding proteins (GBP) fall into the last class.[1]
GBP genes have been universally recognized in mammalian as well as in most other vertebrate genomes.[2] A single cluster of seven human GBP genes (GBP1-GBP7) is found on chromosome 1q22.2. Unlike humans, in genetically controllable disease models such as mice and zebrafish,[3] members of the GBPs gene family are organized in more than one cluster, in this case, 11 (Gbp2b- Gbp110 and 4 genes (Gbp1-Gbp4), respectively. Examinations of GBP-related sequences have shown that zebrafish gbp3 and gbp4 contain an additional function to find (FIIND) and a caspase recruitment (CARD) domains that resemble those found within the inflammasome-related proteins: Apoptosis-associated speck-like protein containing a CARD (PYCARD) and NLR Family Pyrin Domain Containing 1 (NLRP1).[3][4]