HLTF

Protein-coding gene in the species Homo sapiens From Wikipedia, the free encyclopedia

Helicase-like transcription factor is an enzyme that in humans is encoded by the HLTF gene.[5][6]

PDBOrtholog search: PDBe RCSB
AliasesHLTF, HIP116, HIP116A, HLTF1, RNF80, SMARCA3, SNF2L3, ZBU1, helicase-like transcription factor, helicase like transcription factor
Quick facts Available structures, PDB ...
HLTF
Available structures
PDBOrtholog search: PDBe RCSB
Identifiers
AliasesHLTF, HIP116, HIP116A, HLTF1, RNF80, SMARCA3, SNF2L3, ZBU1, helicase-like transcription factor, helicase like transcription factor
External IDsOMIM: 603257; MGI: 1196437; HomoloGene: 30136; GeneCards: HLTF; OMA:HLTF - orthologs
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_003071
NM_139048
NM_001318934
NM_001318935

NM_009210
NM_144959
NM_001355097

RefSeq (protein)

NP_001305863
NP_001305864
NP_003062
NP_620636

NP_033236
NP_001342026

Location (UCSC)Chr 3: 149.03 – 149.09 MbChr 3: 20.11 – 20.17 Mb
PubMed search[3][4]
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Function

This gene encodes a member of the SWI/SNF family. Members of this family have helicase and ATPase activities and are thought to regulate transcription of certain genes by altering the chromatin structure around those genes. The encoded protein contains a RING finger DNA binding motif. Two transcript variants encoding the same protein have been found for this gene. However, use of an alternative translation start site produces an isoform that is truncated at the N-terminus compared to the full-length protein.[6]

HLTF is a double-stranded DNA translocase, one of two human homologs of Saccharomyces cerevisiae RAD5 besides SHPRH (SNF2 histone linker PHD RING helicase), that is able to carry out fork regression, similarly to Rad5.[7]

Interactions

HLTF has been shown to interact with UBE2N,[8] RAD18[8] and UBE2V2[8](see also STRING functional and physical associations network : under the option 'search by name' enter 'protein name' of interest, HLTF, klick on 'GO! ', choose 'organism ', klick on 'continue ->' ).

References

Further reading

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