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KARS1

Protein-coding gene in the species Homo sapiens From Wikipedia, the free encyclopedia

Lysine—tRNA ligase (also called Lysyl-tRNA synthetase) is an enzyme that in humans is encoded by the KARS1 gene (previously KARS).[5][6][7]

AliasesKARS1, KARS2, CMTRIB, lysyl-tRNA synthetase 1, KRS, Lysyl-tRNA synthetase, KARS, DFNB89, LEPID, DEAPLE
PDBOrtholog search: PDBe RCSB
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KARS1
Identifiers
AliasesKARS1, KARS2, CMTRIB, lysyl-tRNA synthetase 1, KRS, Lysyl-tRNA synthetase, KARS, DFNB89, LEPID, DEAPLE
External IDsOMIM: 601421; MGI: 1934754; GeneCards: KARS1
Available structures
PDBOrtholog search: PDBe RCSB
Enzyme activity
EC #BRENDAExPASyKEGGMetaCyc
6.1.1.6
Orthologs
DatabasesNCBI: entry; OMA: entry
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_005548
NM_001130089
NM_001378148

NM_001130868
NM_001286384
NM_053092
NM_001363429
NM_001363430

RefSeq (protein)

NP_001123561
NP_005539
NP_001365077

NP_001124340
NP_001273313
NP_444322
NP_001350358
NP_001350359

Location (UCSC)Chr 16: 75.63 – 75.65 MbChr 8: 112.72 – 112.74 Mb
PubMed search[3][4]
Wikidata
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Function

Aminoacyl-tRNA synthetases are a class of enzymes that charge tRNAs with their cognate amino acids. Lysyl-tRNA synthetase is a homodimer localized to the cytoplasm which belongs to the class II family of tRNA synthetases. It has been shown to be a target of autoantibodies in the human autoimmune diseases, polymyositis or dermatomyositis[7]

Besides its role in translation, Lysyl-tRNA synthetase is involved in a signaling pathway leading to gene activation.[8] Following physiological stimulation of a variety of cells, Lysyl-tRNA synthetase binds to the transcription factors MITF[9] and USF2[10] and can then influence their transcriptional activities. Such physiological stimulation includes immunological activation of mast cells, so this pathway maybe relevant to the allergic response.

Interactions

KARS1 has been shown to interact with Multisynthetase complex auxiliary component p38.[11][12] Physiological trigger such as immunological activation results in the phosphorylation of LysRS on its serine residues. It separates from the multisynthetase complex and initiates Ap4A production.[8]

References

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