Saccharopine dehydrogenase

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Saccharopine Dehydrogenase
Saccharopine dehydrogenase from Magnaporthe grisea
Identifiers
SymbolSaccharop_dh
PfamPF03435
Pfam clanCL0063
InterProIPR005097
SCOP21ff9 / SCOPe / SUPFAM
Available protein structures:
PDB  IPR005097 PF03435 (ECOD; PDBsum)  
AlphaFold
saccharopine dehydrogenase (putative)
Identifiers
SymbolSCCPDH
NCBI gene51097
HGNC24275
RefSeqNM_016002
UniProtQ8NBX0
Other data
LocusChr. 1 q44
Search for
StructuresSwiss-model
DomainsInterPro

In molecular biology, the protein domain Saccharopine dehydrogenase (SDH), also named Saccharopine reductase, is an enzyme involved in the metabolism of the amino acid lysine, via an intermediate substance called saccharopine. The Saccharopine dehydrogenase enzyme can be classified under EC 1.5.1.7, EC 1.5.1.8, EC 1.5.1.9, and EC 1.5.1.10. It has an important function in lysine metabolism and catalyses a reaction in the α-aminoadipate pathway. This pathway is unique to fungal organisms therefore, this molecule could be useful in the search for new antibiotics. This protein family also includes saccharopine dehydrogenase and homospermidine synthase. It is found in prokaryotes, eukaryotes and archaea.

SDH uses nicotinamide adenine dinucleotide (NAD+) as an oxidant to catalyse the reversible oxidative deamination of the substrate, saccharopine. It forms the products, lysine and alpha-ketoglutaric acid. This is shown in the following chemical reaction:[1]

+ NAD+
 
 
H2O
H+
Reversible left-right reaction arrow with minor forward substrate(s) from top left, minor forward product(s) to top right, minor reverse substrate(s) from bottom right and minor reverse product(s) to bottom left
H2O
H+
 
+ NADH +
 

Saccharopine dehydrogenase EC catalyses the condensation to of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine.[2] In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF).

Homospermidine synthase proteins (EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction.[3]

Structure

Clinical significance

References

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